Docker image¶
Docker is a light-weight way to deploy applications. We offer an image for READemption that can be easily retrieved and used once you have Docker installed. To get the image run
$ sudo docker pull tillsauerwein/reademption
Now you have the image READempmtion image and should see it shown in your list of docker images:
$ sudo docker images
REPOSITORY TAG IMAGE ID CREATED VIRTUAL SIZE
tillsauerwein/reademption 2.0.2 41c42c0a6c35 42 minutes ago 3.31GB
tillsauerwein/reademption latest 241c42c0a6c35 42 minutes ago 3.31GB
You can simply start the container by running the following command:
$ sudo docker run -i -t reademption
root@3b9e7fd860ee:/# reademption -v
READemption version 2.0.2
Inside of this environment you have access to the local installation of READemption.
You can find a detailed tutorial of using READemption with docker at https://github.com/Tillsa/READemption_Docker_Tutorial. The tutorial is the same as the single-species analysis shown at the Performing example analyses section.